Nine Rivers

Molecular modeling in Materials Sciences Web development Programming IT

Entries for May, 2010

Compile gromacs on Cygwin

Just some notes: 1. manually download and install fftw3. Do not use the cgywin package, or the path will not be recognized by Gromacs. 2. Needed Cygwin packages: lapack, gcc, g77, make and nasm. nasm is required for both fftw and Gromacs in order to compile the assembly codes.

Print view for any web page with firefox web developer plugin

Not all websites have links to “printable version” like wikipedia. Although many websites have stunning  look, it is really ugly when you try to print them. Some parts of the pages will be missing or the format is totally a mess. Instead of waiting the website owner realize this and prepare printer friendly pages for [...]

Change Pidgin theme on Windows

I’m using Pidgin v2.7 and Windows XP. I’ve tried most of the methods flying on the internet about changing themes for Pidgin, but none of them works. These include using the gtkthemeselector.exe. I noticed the latest Pidgin using a  “%APPDATA%\.purple\gtkrc-2.0″ to control the look and feel once the “GTK+ theme control” plugin is enabled. The [...]

A bash script to plot multiple files in old version of gnuplot

For gnuplot version older than 4.4, ‘plot for’ is not an option to plot multiple files. In order to make it work and easier, I wrote a BASH script to generate the gnuplot input for multiple file plotting. You are lucky too find this if you are still using old version of gnuplot. No need [...]

  

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